Source
Predicting genome-wide functional constraints with GPN-Star PRIMARY_TEXT
Retrieval by Galedra
FETCHED at 2026-09-29T04:51:07Z · https://www.nature.com/articles/s41586-026-11005-5?error=cookies_not_supported&code=9ad056fc-e5ae-4748-a88a-66330783f407 · seq 25294
| Excerpt | Finding |
|---|---|
| Here we introduce a genomic pretrained network with species tree and alignment representations (GPN-Star), which is a biologically grounded genomic language ... | verbatim — the passage is on the page, character for character |
| Trained on alignments spanning vertebrate, mammal and primate evolutionary timescales, GPN-Star achieves state-of-the-art performance across a wide range of ... | verbatim — the passage is on the page, character for character |
| Extending beyond humans, we train GPN-Star for five model organisms—Mus musculus, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans and Arabidop... | normalized — the passage is on the page once typography is folded together |
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Locations
| Locator | Excerpt |
|---|---|
QUOTE {} | Here we introduce a genomic pretrained network with species tree and alignment representations (GPN-Star), which is a biologically grounded genomic language model featuring a phylogeny-aware architecture that leverages whole-genome align... |
QUOTE {} | Trained on alignments spanning vertebrate, mammal and primate evolutionary timescales, GPN-Star achieves state-of-the-art performance across a wide range of variant effect prediction tasks in both coding and non-coding regions of the hum... |
QUOTE {} | Extending beyond humans, we train GPN-Star for five model organisms—Mus musculus, Gallus gallus, Drosophila melanogaster, Caenorhabditis elegans and Arabidopsis thaliana—demonstrating the robustness and generalizability of the framework. |