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Claim

SRPX2 expression was elevated in CKD patient kidney and serum samples and in experimental renal-fibrosis models, while global or tubular-epithelial deletion of Srpx2 attenuated kidney injury and fibrosis in mice.

Type CAUSAL · truth-evaluable: yes · status at snapshot: ACTIVE · created seq 20475 · qualifiers {"scope":"Human CKD samples, cultured human renal tubular cells, and mouse UUO/folic-acid nephropathy models; preclinical causality."}

30 words; atomic claims are usually under 25a conjunction joins clauses that may be separately evaluable

Referenced 110 times: checked 2, looked up by assistants 0, viewed 78, shared 30. A count of attention, not evidence.

Topics

Biology · 1efd24fe Medicine · 1efd24fe

Assessment

Supported

Score: 0.9601 under ledger-default@0.3.0 at snapshot 27745

3 of 4 review checks done · 1 counted · 2 by the author only

2 independent evidence lineages · review checks 1 of 4 · stability LOW

Main unresolved issue: 3 counted evidence items have no independence review; repeats of one origin may be counted as several coverage:438cb8c6-9dfe-8b3c-8782-d327a7ab7568

Not yet independently audited.This assessment depends heavily on modeling choices.Evidence reviewed so far supports this claim, but only 1 of 4 review checks has been done.A quoted passage from nature.com and news.bioon.com was not found on the page when Galedra fetched it.

Why?

Strongest counted support: The abstract reports elevated SRPX2, attenuation of injury and fibrosis after Srpx2 ablation, and the experimental models used. weight 2.000000 evidence

Suppressed as dependent: The excerpt directly reports elevated SRPX2 in CKD kidney biopsies and serum, upregulation in mouse fibrosis models and human tubular cells, and attenuation of kidney injury and fibrosis after global or tubular-epithelial Srpx2 ablation.

Review gaps: qualifiers reviewed, opposing search done, independence reviewed

What would most change this: One independent, direct measurement that contradicts this claim would move it from Supported to Leans supported.

Hide calculation

0.9601 under ledger-default@0.3.0 at snapshot 27745 · state Supported · Review checks: 1 of 4 · stability LOW · 3 sources, 2 independent lineages

Model ledger-default@0.3.0 (the default model, not the answer) · snapshot 27745 · trace sha256:d831857a81b069804548401f82c2164fd06b2e416cec964d946fa62d0d47343f

Last changed at entry seq 25742; nothing logged since has borne on this claim.

How the number was reached

Each counted link is weighed by multiplying the factors the model declares; a factor it does not declare is not shown. Every factor name below links to what that number means.

LinkWorkingWeightCounted as
eb827f35 support relevance DIRECT 2.0 × observation MEASUREMENT 1.0 × interpretation 0 steps, 1 − 0.15 × 0 1.000000 × authenticity UNVERIFIED 1.0 × extraction UNVERIFIED 1.0 × provenance INDEPENDENT 1.0 × edition NAMED_OR_UNRELATED 1 2.000000 2.000000
91093704 support relevance DIRECT 2.0 × observation DIRECT_TEXT 0.9 × interpretation 0 steps, 1 − 0.15 × 0 1.000000 × authenticity UNVERIFIED 1.0 × extraction UNVERIFIED 1.0 × provenance INDEPENDENT 1.0 × edition NAMED_OR_UNRELATED 1 1.800000 0.000000 (dependent strongest only, kept eb827f35)
cab3f6f6 support relevance DIRECT 2.0 × observation DIRECT_TEXT 0.9 × interpretation 0 steps, 1 − 0.15 × 0 1.000000 × authenticity UNVERIFIED 1.0 × extraction UNVERIFIED 1.0 × provenance INDEPENDENT 1.0 × edition NAMED_OR_UNRELATED 1 1.800000 1.800000

prior 0.35 → log-odds -0.619039 + 3.800000 (the counted weights) = 3.180961 → probability 0.9601

Under neighbouring settings of the same model: 0.8850 to 0.9869, a spread of 0.1019.

Half-even rounding, six places for weights and four for the probability. The same inputs under the same model reproduce this exactly; that is what the trace hash above is for. How a score is worked out explains every factor, why it is there, and what the model sets it to.

Your view

Sign in to register whether you agree or disagree. A view is yours alone and never changes the assessment.

Registered views

Nobody has registered a view yet.

Registered views are personal belief, not evidence: they never change Galedra's assessment. Affiliations are self-declared and shown only for groups of 5 or more.

Checked as part of

Statements this claim was broken out of. The claim is scored on its own; a statement's reading only counts its claims.

Evidence for

Evidence against

None.

Qualifications

None.

Suppressed as dependent

EvidenceGroupKept instead
0ef7907eeb827f35

Inferences

Concluded from

None.

Used as a premise in

None.

An inference is interpretation, not evidence: it never changes the assessment of its conclusion. Each premise is a claim with its own evidence.

Threads

None. Threads are for disagreements about how a determination was made — a statement whose figures are not in the passage it rests on, two sources that may share an origin. Something about the world belongs in the evidence above.

Claim edges

None. Edges are stored and displayed; v0.1 does not propagate probability across them.

Review checklist

Review checks: 1 of 4

3 checks by this claim's own author, alongside the independent review above. 1 OPPOSING EVIDENCE SEARCH · 1 QUALIFIER CHECK · 1 EVIDENCE VERIFICATION. A check by the person who recorded a claim does not raise its review coverage.

CheckDoneBy
qualifiers reviewedno
opposing search doneno
independence reviewedno
primary source reviewedyeseb827f35, 91093704

Summary

Supported. The main support is: The abstract reports elevated SRPX2, attenuation of injury and fibrosis after Srpx2 ablation, and the experimental models used. 8c117e9b

1 further item repeats the same origin and is not independent evidence. 0ef7907e

A search for evidence in the opposing direction found none. 05deba08

Review checks: 1 of 4. coverage:438cb8c6-9dfe-8b3c-8782-d327a7ab7568

Generated by stub-v0.1; every sentence cites graph ids.

Contribution history

seqeventdetail
20475APPENDED
20476ACCEPTAUTOMATIC_AFTER_VALIDATION
20487LINK_EVIDENCEby 1efd24fe (accepted)
20498LINK_EVIDENCEby 1efd24fe (accepted)
24104TASK_RESULTby 1efd24fe (accepted)

Score trace

{
  "claim": "438cb8c6-9dfe-8b3c-8782-d327a7ab7568",
  "links": [
    {
      "link": "195d45a4-5915-8cc2-b765-c28ceb827f35",
      "group": null,
      "edition": "NAMED_OR_UNRELATED",
      "evidence": "27ab6380-5d71-8b46-b0b4-4bfd8c117e9b",
      "direction": "SUPPORT",
      "magnitude": "2.000000",
      "relevance": "DIRECT",
      "extraction": "UNVERIFIED",
      "provenance": "INDEPENDENT",
      "observation": "MEASUREMENT",
      "source_type": "PRIMARY_TEXT",
      "authenticity": "UNVERIFIED",
      "audit_confirmed": false,
      "effective_weight": "2.000000",
      "interpretive_steps": 0
    },
    {
      "kept": "195d45a4-5915-8cc2-b765-c28ceb827f35",
      "link": "6997c91f-cf6e-864f-a6b4-6eee91093704",
      "group": null,
      "reason": "dependent_strongest_only",
      "edition": "NAMED_OR_UNRELATED",
      "evidence": "d33f7aff-b985-8ba8-b481-7d190ef7907e",
      "direction": "SUPPORT",
      "magnitude": "1.800000",
      "relevance": "DIRECT",
      "extraction": "UNVERIFIED",
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      "source_type": "PRIMARY_TEXT",
      "authenticity": "UNVERIFIED",
      "audit_confirmed": false,
      "effective_weight": "0.000000",
      "interpretive_steps": 0
    },
    {
      "link": "8f067667-c6d4-8546-901c-5f34cab3f6f6",
      "group": null,
      "edition": "NAMED_OR_UNRELATED",
      "evidence": "1d95273e-2d21-8edd-8dc9-326e25078c35",
      "direction": "SUPPORT",
      "magnitude": "1.800000",
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      "extraction": "UNVERIFIED",
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      "source_type": "SECONDARY_TEXT",
      "authenticity": "UNVERIFIED",
      "audit_confirmed": false,
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      "interpretive_steps": 0
    }
  ],
  "model": "ledger-default@0.3.0",
  "prior": "0.35",
  "variants": {
    "spread": "0.1019",
    "permissive": "0.9869",
    "conservative": "0.8850"
  },
  "code_hash": "sha256:c61a6fdf35a754a0d7e958df149036a083c0eaeb7d2d2e52704ec32b0c36def7",
  "contested": false,
  "stability": "LOW",
  "claim_type": "CAUSAL",
  "config_hash": "sha256:86768038080b8ab5233f1e4b7aba10af05b5bb44caa432095150b90e81209809",
  "probability": "0.9601",
  "provisional": true,
  "evidence_sum": "3.800000",
  "snapshot_seq": 25742,
  "prior_log_odds": "-0.619039",
  "support_groups": 2,
  "model_dependent": true,
  "review_coverage": "0.25",
  "truth_evaluable": true,
  "assessment_state": "SUPPORTED",
  "review_checklist": {
    "qualifiers_reviewed": {
      "by": [],
      "ok": false
    },
    "opposing_search_done": {
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    "independence_reviewed": {
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    "primary_source_reviewed": {
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      ],
      "ok": true
    }
  },
  "contradict_groups": 0,
  "rounding_boundary": false,
  "posterior_log_odds": "3.180961",
  "not_applicable_reason": null,
  "independence_unreviewed": 3
}